PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM11G03240.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Protein Properties

Length: 284aa MW: 31642.2 Da PI: 7.4695

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM11G03240.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	90.4	1.4e-28	38	129	1	87
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k ltpsdv+k++rlv+pk++ae++ g ++ l++ede g W+++++y+ +s++yvltkGW+++vk+++L++gD+v F++++ OGLUM11G03240.1 38 FEKPLTPSDVGKLNRLVIPKQHAERYfplgaGDAADKGLILSFEDEAGAPWRFRYSYWTSSQSYVLTKGWSRYVKEKRLDAGDVVHFERVRG 129 99**************************9666678899**********************************************7642 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MAMNHPLFSQ EQPQSWPWGV AMYANFHYHH HYEKEHMFEK PLTPSDVGKL NRLVIPKQHA 60 ERYFPLGAGD AADKGLILSF EDEAGAPWRF RYSYWTSSQS YVLTKGWSRY VKEKRLDAGD 120 VVHFERVRGS FGVGDRLFIG CRRRGDAAAA QTPAPPPAVR VAPAAQNAGE QQPWSPMCYS 180 TSGGGSYPTS PANSYAYRRA ADHDHGDMHH ADESPRDTDS PSFSAGSAPS RRLRLFGVNL 240 DCGPEPEADT TAAATMYGYM HQQSSYAAMS AVPRAIHKKI DYEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36080.2	1e-53	B3 family protein

Link Out ? help Back to Top
Ensembl	OGLUM11G03240.1