PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM11G02220.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 275aa    MW: 29956.8 Da    PI: 4.1968
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM11G02220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM286e-091766250
              NAM  2 ppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykvePwdLpkk 50
                     p G+ F P+ e+l+ +yL++ ++g++ e+  ++++e+d+y ++P +L ++
  OGLUM11G02220.1 17 PSGYFFVPKPEQLIRDYLNHWITGRPSEElRDIVREADVYGSDPATLTEA 66
                     89************************66515679999**********742 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MAEEDDKKQK GPDVTVPSGY FFVPKPEQLI RDYLNHWITG RPSEELRDIV READVYGSDP  60
ATLTEAHSAY GHDGNNLPAA ITDEGIMVIC KVYLSPRAKE ATADEEERQE TNVVPGPKRL  120
REAEATGYDA PAPETPQPDV GCSYSGGGET SQATASMDYC CSTTTHTADD TANAAYYHGD  180
ADAIKPDAYD GGDYGIGINA DGELVLCGNG HGGIGTQGQM PLAMQNTNGE MTLFSPMNGY  240
GVGFNEEVRQ EPQVEGEVEM DNFFNDLFRR LRRRR