PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM11G02110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 564aa MW: 61762.7 Da PI: 5.357 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 321.1 | 2.3e-98 | 174 | 556 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 l+elL++cA+av+sg+ + a +lL++++ ++sp+gd+++Rla+yf+ +L+arl++ +l + l +s+++ + e l a+++f ++ + ++ OGLUM11G02110.1 174 LRELLMSCAQAVASGNRRSAGELLEQIKRHSSPAGDATERLAHYFADGLEARLTG-AASLERRLLASAER-ASAMELLEAYQVFMAACCFKWVA 265 689****************************************************.67777777666665.579999***************** PP GRAS 95 hltaNqaIleavegeervHiiDfdis.qGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185 + aN aIl+a+eg +++Hi+D++ + +GlQWp+Llq La+R++gpp++R+T vg+p++g +++le+tg+rL++ A+++g+pf+f+++++ r OGLUM11G02110.1 266 FTFANMAILRAAEGRSKLHIVDYGGQyHGLQWPSLLQRLAEREGGPPEVRMTLVGHPQPGfrPARRLERTGRRLSNGARAFGLPFKFRAVAVAR 359 ***********************86538****************************************************************** PP GRAS 186 ledleleeL.....rvkp.gEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271 +e+++ e+ v+p +Ea++Vn vl+l +l+des+ ++ +rd+vL +++++P v+v + + h+++ F +rf eal ++salfd+l OGLUM11G02110.1 360 WETVTAEDVvgvggGVDPdEEAVVVNDVLSLGTLMDESGVFDDpsPRDTVLGSIRDMRPAVFVQAVVNGAHGAPFFPTRFREALFFFSALFDML 453 ********9888888888999*****************98877779************************************************ PP GRAS 272 eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkd 364 a+ p+e + r+++Er +l+r++v v+a egaer+er et+++W++r ++aG+++v+++ ++++ +++ +r+ + +++ +ee+ g+l++gWk+ OGLUM11G02110.1 454 GATTPEEGsHLRVVLERDVLRRAAVGVIAGEGAERVERPETYRRWQARNRRAGLRQVAVEGDVVEAVRRRVRRRHHEEFVIEEDAGWLLQGWKG 547 77777765499****************************************************************999**************** PP GRAS 365 rpLvsvSaW 373 r L++ SaW OGLUM11G02110.1 548 RILYAHSAW 556 ********* PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 564 aa Download sequence |
MGPAAPPSEA AAAADDVVLP YISRILMEED MDDDVFFCLY PDHPALLEAQ QPFAQILSSS 60 SGISGELNSA AMEDSAALMM QGSGNGRGRK GSKHGGDELE AEVGRASKLM ATLEEEDDDD 120 DGVGEMLEKM MLNGDEDEAF HGETNAPRVP AEKKGGKPAP RRRRRQGKGE VVDLRELLMS 180 CAQAVASGNR RSAGELLEQI KRHSSPAGDA TERLAHYFAD GLEARLTGAA SLERRLLASA 240 ERASAMELLE AYQVFMAACC FKWVAFTFAN MAILRAAEGR SKLHIVDYGG QYHGLQWPSL 300 LQRLAEREGG PPEVRMTLVG HPQPGFRPAR RLERTGRRLS NGARAFGLPF KFRAVAVARW 360 ETVTAEDVVG VGGGVDPDEE AVVVNDVLSL GTLMDESGVF DDPSPRDTVL GSIRDMRPAV 420 FVQAVVNGAH GAPFFPTRFR EALFFFSALF DMLGATTPEE GSHLRVVLER DVLRRAAVGV 480 IAGEGAERVE RPETYRRWQA RNRRAGLRQV AVEGDVVEAV RRRVRRRHHE EFVIEEDAGW 540 LLQGWKGRIL YAHSAWVVAE DGAH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G07530.1 | 1e-77 | GRAS family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM11G02110.1 |