PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G16890.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 545aa MW: 57751.1 Da PI: 6.6933

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G16890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25	3.1e-08	306	338	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps ++ LA+++gL+ +qV +WF N R + OGLUM10G16890.1 306 DQYPSDVDKHILARQTGLSRSQVANWFINARVR 338 68*****************************88 PP
2	BELL	93.9	1.5e-30	207	277	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +elq+ k kL ++leeVd+rY++y+eq++++++sFeavag +a+ Yt+lA+++iSrhFr+L+d ++ q+ OGLUM10G16890.1 207 AAELQRLKGKLYTMLEEVDRRYRRYCEQMRALAASFEAVAGERAAAAYTRLASRTISRHFRSLRDGVVAQL 277 5799****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MAHDPSLGYA DYFAAEVDGA GATELYGLQQ HQQGVGVAEM FGVRGLMPAA HAHEQSKGVG 60 ALVVGGGGVD DGGATTLPTV HFGGLGELHH HQHRQSQAPL SLSLHRPEAA ATSLLMQQQQ 120 QHLHHQPSPP AGAASTWQLQ QGAWHLRGSR FLLPTQQLLQ EFCSLPVKST TSPSSASKAT 180 KPPQEEAAGG GGSSSWTAPT QIQSMDAAEL QRLKGKLYTM LEEVDRRYRR YCEQMRALAA 240 SFEAVAGERA AAAYTRLASR TISRHFRSLR DGVVAQLQAV RKQLGEKDTA VPGMTKGETP 300 RLRVLDQYPS DVDKHILARQ TGLSRSQVAN WFINARVRLW KPMVEEMYAE EMKDEEGSGQ 360 STQASNPQNP NPSSYTSEVR GGGGGGEDRG EQKPSRAQLL HDAGSLASVV SIGHGGAGRT 420 MVDHHHHQSL NFGMMDQLDF DAYEAAGGGQ GFGAGGGVSL TLGLQQQHAD PHDGVNVAFA 480 AAAAPPNSSG VAAEYLFMGG GGGEHQQQLP QAAQFGAVME GDAASHYRGL SATAAGFHLL 540 HDLAG

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MAHDPSLGYA DYFAAEVDGA GATELYGLQQ HQQGVGVAEM FGVRGLMPAA HAHEQSKGVG  60
ALVVGGGGVD DGGATTLPTV HFGGLGELHH HQHRQSQAPL SLSLHRPEAA ATSLLMQQQQ  120
QHLHHQPSPP AGAASTWQLQ QGAWHLRGSR FLLPTQQLLQ EFCSLPVKST TSPSSASKAT  180
KPPQEEAAGG GGSSSWTAPT QIQSMDAAEL QRLKGKLYTM LEEVDRRYRR YCEQMRALAA  240
SFEAVAGERA AAAYTRLASR TISRHFRSLR DGVVAQLQAV RKQLGEKDTA VPGMTKGETP  300
RLRVLDQYPS DVDKHILARQ TGLSRSQVAN WFINARVRLW KPMVEEMYAE EMKDEEGSGQ  360
STQASNPQNP NPSSYTSEVR GGGGGGEDRG EQKPSRAQLL HDAGSLASVV SIGHGGAGRT  420
MVDHHHHQSL NFGMMDQLDF DAYEAAGGGQ GFGAGGGVSL TLGLQQQHAD PHDGVNVAFA  480
AAAAPPNSSG VAAEYLFMGG GGGEHQQQLP QAAQFGAVME GDAASHYRGL SATAAGFHLL  540
HDLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	2e-41	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G16890.1