PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G16680.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 395aa MW: 42602.5 Da PI: 6.8009

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G16680.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.7	4.3e-07	252	300	14	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 R +A rs +R+ +i+eLe+kv+ L++e ++L +l l+ ++ + ++ OGLUM10G16680.1 252 RQSAARSKERRMRYIAELEQKVQILQTEATTLSAQLTLLQRDSSGMATQ 300 89**********************************9999887766665 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MNTTSANELM MHRHVQAAPY AAAPQQQGGK QRAPGLPPTP PPPPAAASSH SSHGDVCMDE 60 TARGGLLPPR KAHRRSRSDV PFGYFQPLPP PLPKMEAGGG WALPGCGGAG DVDLLNAYMS 120 LEGMGGADGL NNSDGDSRGS SMRTNGADSS ENESEDYVGA DSQALLWGGA GGGEAAGKKR 180 RNNAAGETAA RHARSLSMDS LMGKLSFAAN GEPAKFSLEF GSGEFTPAEM KRIMADEKLA 240 EMALADPKRV KRQSAARSKE RRMRYIAELE QKVQILQTEA TTLSAQLTLL QRDSSGMATQ 300 NNELKFRLQS MEQQAQLRDA LNEALTAEVQ RLKLAANEVG DTSSSSNLAH QIQLRCQNQM 360 LDLHKQQQQQ VEQIPFYQLE QPEQQNGTAR NHESK

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MNTTSANELM MHRHVQAAPY AAAPQQQGGK QRAPGLPPTP PPPPAAASSH SSHGDVCMDE  60
TARGGLLPPR KAHRRSRSDV PFGYFQPLPP PLPKMEAGGG WALPGCGGAG DVDLLNAYMS  120
LEGMGGADGL NNSDGDSRGS SMRTNGADSS ENESEDYVGA DSQALLWGGA GGGEAAGKKR  180
RNNAAGETAA RHARSLSMDS LMGKLSFAAN GEPAKFSLEF GSGEFTPAEM KRIMADEKLA  240
EMALADPKRV KRQSAARSKE RRMRYIAELE QKVQILQTEA TTLSAQLTLL QRDSSGMATQ  300
NNELKFRLQS MEQQAQLRDA LNEALTAEVQ RLKLAANEVG DTSSSSNLAH QIQLRCQNQM  360
LDLHKQQQQQ VEQIPFYQLE QPEQQNGTAR NHESK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	2e-59	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G16680.1