PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM10G14600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB | ||||||||
Protein Properties | Length: 411aa MW: 44331.4 Da PI: 8.4151 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.1 | 4.1e-13 | 3 | 51 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+l+++ +++G g +W + + +g+ R++ +c+srw++yl OGLUM10G14600.1 3 KGKWSKEEDDLIKNHMEKYGIGrSWQALSDALGLQRCGRSCRSRWLNYL 51 79******************999************************97 PP | |||||||
2 | Myb_DNA-binding | 32 | 3e-10 | 58 | 101 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g +++ E+ ++ + + G+ W++Ia+ ++ gRt+ +k++w++ OGLUM10G14600.1 58 GDFSPAEERIICKMYSKKGSS-WSAIAAQLP-GRTDLAVKNYWNST 101 679****************99.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence |
MKKGKWSKEE DDLIKNHMEK YGIGRSWQAL SDALGLQRCG RSCRSRWLNY LRPGLKHGDF 60 SPAEERIICK MYSKKGSSWS AIAAQLPGRT DLAVKNYWNS TLKKRFPAAA AARSTAAARR 120 RHRPAASATT SSDDDDDVDV DDATPPGLAL VVYSEGSTAA AAAAGELAPY SISSPAATAD 180 AAEEEEPIAA VPISTCILAL PPPPPPPPPP PSDATGGEVS IPCFPFSPLP FIEPDLPELT 240 WTTDLDDITA TFDAAACRYP KRPHPITPDS PCLPKLPAIA GFDDVQSFLS CICLRYNTSP 300 FLLARATAAP PAAAADRCLA GRRCLYSTTP PPPLSPLHWR CSRRDPELGA DVSALLLRGR 360 LGARQLFDEL PHRVRWRRGY LRAAFAASVS NLNARDGHRG VKAEAMKSSA Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37780.1 | 6e-40 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM10G14600.1 |