PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM10G08720.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 17368.4 Da PI: 11.3892 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 44.2 | 6e-14 | 87 | 153 | 66 | 127 |
NAM 66 kkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfy...kgrapkgektdWvmheyr 127 +k+++++r+ r+++ g+Wka+ ++k+v sk +g +vg k t+vfy + ++++ kt+W mhe++ OGLUM10G08720.3 87 TKARNKRRPMRVADGGTWKASDESKTVRSKkvGGIDVGQKFTMVFYerrFEGDQNPIKTNWGMHEFT 153 46678899********************99888899**********43313456678********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MGTAAAAVEA TATMGSGRGR RRWCRSTART GTACLSASTS SPRTWSSSPS SCASSSEERS 60 PAPSTTSSSI SGYLNSTPPS SMRQFATKAR NKRRPMRVAD GGTWKASDES KTVRSKKVGG 120 IDVGQKFTMV FYERRFEGDQ NPIKTNWGMH EFTKIIPGTK N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26870.1 | 4e-07 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM10G08720.3 |