PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM09G17450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 225aa MW: 24562.6 Da PI: 7.6372 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3.2e-18 | 84 | 130 | 2 | 52 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkk 52 ++ GVr+++ +grWvAeI+d +r r +lg+f+taeeAa+a+++a++ OGLUM09G17450.1 84 RFVGVRQRP-SGRWVAEIKD----SaQRVRLWLGTFDTAEEAARAYDEAARF 130 589******.7*********....4456*********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MWHSGMWGLR GFHADSAATS DKTRTDGQTL GTEIRHLPHT WQRDVERQMA TNTIRSELMA 60 AQESGRMATA TGGVVAAKAR RGRRFVGVRQ RPSGRWVAEI KDSAQRVRLW LGTFDTAEEA 120 ARAYDEAARF ALAAVFRRCM QPAAATRQQC GAADTTVHVK NAVQPSFVVP RRTEAPPPPT 180 TPMLLAEDVL VDFDDDGLGS AGVETAFMVS SSLIVPSSFG IDDDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-08 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM09G17450.1 |