PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G11780.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 285aa    MW: 31334.3 Da    PI: 5.2231
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G11780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-192473255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+G+r+++ +g+W+AeIrdps+     r++lg++ taeeAa+a++a ++k++g
  OGLUM09G11780.1 24 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYNTAEEAARAYDAEARKIRG 73
                     69*******.**********965...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MLTTKLVQHD GPTARSAKRK RKNQYRGIRQ RPWGKWAAEI RDPSKGVRVW LGTYNTAEEA  60
ARAYDAEARK IRGKKAKVNF PDEPAVAQKL SLKQNAAKQE KLAPPLKTCG DDAFFQLNSS  120
DNDLFAMLAK VPAKPAEPVD LMPPVKPLAS TETFEMNMLS DTSSNSFGSS DFGWEDDTLT  180
PDYTSVFVPN AAMPAYGEPA YLTGGAPKRM RNNYGIAVPQ GNGMPNLAQN MPTFDPEMKY  240
LPLPYVESSS DESMDNLLQN DATQDGASNE GIWSLDELLM AAGAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.13e-28ERF family protein