PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G10370.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 292aa    MW: 31514 Da    PI: 6.1261
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G10370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.63.1e-46231631128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pk........kvkaeekew.yfFskrdkkyatgkrknratksgyWk 84 
                      lppGfrF+Ptd elv +yL++k+++  ++   +i+++d+y++ePwdL p         ++++ee+++ yfF++r+ + ++g+r+nrat++gyWk
  OGLUM09G10370.1  23 LPPGFRFRPTDGELVAHYLARKAADAGFTS-AAIRDADLYRAEPWDLlPPprcdaaaeEMEEEEERCgYFFCTRSFRWPSGTRTNRATAAGYWK 115
                      79*************************999.78**************622457777665555555558************************** PP

              NAM  85 atgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +tgkdk+vl+     +g+ vg+kktLvfy+grap+gekt+Wvmheyrl
  OGLUM09G10370.1 116 STGKDKAVLHGggggGGRPVGVKKTLVFYRGRAPRGEKTSWVMHEYRL 163
                      **********988877888***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MAGGGGGDRA PSSSSTAMIS RLLPPGFRFR PTDGELVAHY LARKAADAGF TSAAIRDADL  60
YRAEPWDLLP PPRCDAAAEE MEEEEERCGY FFCTRSFRWP SGTRTNRATA AGYWKSTGKD  120
KAVLHGGGGG GGRPVGVKKT LVFYRGRAPR GEKTSWVMHE YRLLHGGAAA TASSSPTPTT  180
VVARSEWVIC RVFVRKTPDG NNDRGTTEHH LPSDDAHLRS SPAPANSVDG AGHASCSFFS  240
GANESMAPSD HFNIGDDMIL HGHDEEELLM MNCSSAFDLP ELLDYESFSL DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.17e-52NAC family protein