PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G23670.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 464aa MW: 49623.2 Da PI: 7.1311

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G23670.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.4	1.9e-10	322	378	5	61
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 kr +r NR +A rs +RK +i+eLe kv++L++e ++L +l +l+ + l + OGLUM08G23670.1 322 KRVKRILANRQSAARSKERKMRYIQELEHKVQVLQTEATTLSAQLTMLQRDSTGLAT 378 899******************************************999987766665 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MDDPGAADPG ARPHHVSPGQ PPVVPRSPTP LDLSSAAAAA AAASFRRLSP SLRPPAHPQA 60 RLPSPYPQIP SSSSAAAAGS SGHHARSLSQ PLFFSLDSLP PLPYADLAAP PAIPPSPPSS 120 SSDPPPPGLP PRKGGHRRSQ SDIPFGFSHL SPPLPPPAPV KREAATAAEG CRSDGDDFAL 180 YDLVNSYMDL DGMEALNSSE ERHEDRDSRA SGTRAGSVAD SSENEAESHS TPVERKDGGG 240 KSRHCRSLSV DSFIEKLNFD ESPKLPLPSP SGGLSRSGSG SLDGGAASLF GAEFANGEFT 300 EAEKKKIMAN ERLAEIALTD PKRVKRILAN RQSAARSKER KMRYIQELEH KVQVLQTEAT 360 TLSAQLTMLQ RDSTGLATQN NELKIRLQAM EQQAQLRDAL NEALTAEVQR LKLATGEITD 420 GRMSKGLQQQ MNSQLIQLQQ LQIQQQQSSQ TTQQGQQQQP QKSA

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MDDPGAADPG ARPHHVSPGQ PPVVPRSPTP LDLSSAAAAA AAASFRRLSP SLRPPAHPQA  60
RLPSPYPQIP SSSSAAAAGS SGHHARSLSQ PLFFSLDSLP PLPYADLAAP PAIPPSPPSS  120
SSDPPPPGLP PRKGGHRRSQ SDIPFGFSHL SPPLPPPAPV KREAATAAEG CRSDGDDFAL  180
YDLVNSYMDL DGMEALNSSE ERHEDRDSRA SGTRAGSVAD SSENEAESHS TPVERKDGGG  240
KSRHCRSLSV DSFIEKLNFD ESPKLPLPSP SGGLSRSGSG SLDGGAASLF GAEFANGEFT  300
EAEKKKIMAN ERLAEIALTD PKRVKRILAN RQSAARSKER KMRYIQELEH KVQVLQTEAT  360
TLSAQLTMLQ RDSTGLATQN NELKIRLQAM EQQAQLRDAL NEALTAEVQR LKLATGEITD  420
GRMSKGLQQQ MNSQLIQLQQ LQIQQQQSSQ TTQQGQQQQP QKSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	2e-83	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G23670.1