PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM08G17690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 25923.6 Da PI: 4.4642 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.1e-17 | 26 | 75 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +grWv+eIr p++ r r++lg++ +ae+Aa+a +aa+ +l+g OGLUM08G17690.1 26 RYKGVRLRK-WGRWVSEIRMPNS---RERIWLGSYESAEKAARAFDAAAVCLRG 75 7******99.**********933...5*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MDHIGISGGG EGGVVSPAQP SSPERRYKGV RLRKWGRWVS EIRMPNSRER IWLGSYESAE 60 KAARAFDAAA VCLRGSRGAG SLNFPESPPP DVRRRFPGAA LTVEQIQAEA ARHANRPFPA 120 NTAAAGGSSS SYSISQRQEA AAPARSTSND DTAMSSVPST DGGAADYDGG DDVIDWSFMD 180 TLPAMSSSAA STNADLVPAM DDFMYGFLHT MPPSPCEDGG EDVMIDGNCN MDQTFFSVDL 240 WIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G19210.1 | 2e-25 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM08G17690.1 |