PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM08G16530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | G2-like | ||||||||
Protein Properties | Length: 373aa MW: 40084.5 Da PI: 6.3228 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 31.1 | 5.2e-10 | 23 | 46 | 2 | 25 |
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 +rlrWt +LHerFv av++LGG++ OGLUM08G16530.1 23 ARLRWTGQLHERFVLAVAELGGAD 46 7*********************97 PP | |||||||
2 | Myb_DNA-binding | 37.5 | 5.6e-12 | 24 | 106 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT.....................................-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....................................tWktIartmg.kgRtlkqcksrwq 45 r+rWT +++e++v av++lGg t+k++ r m g+tl+++ks++q OGLUM08G16530.1 24 RLRWTGQLHERFVLAVAELGGAdskphprafllllppltslimgmadrsalflgaiagaTPKSVLRAMAvPGLTLYHLKSHLQ 106 89******************99************************************************************9 PP | |||||||
3 | G2-like | 37.6 | 4.9e-12 | 76 | 106 | 21 | 51 |
G2-like 21 LGGsekAtPktilelmkvkgLtlehvkSHLQ 51 LG + AtPk++l++m v+gLtl+h+kSHLQ OGLUM08G16530.1 76 LGAIAGATPKSVLRAMAVPGLTLYHLKSHLQ 106 888999************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence |
MSSQQQQQHA GEAPASAAAA ARARLRWTGQ LHERFVLAVA ELGGADSKPH PRAFLLLLPP 60 LTSLIMGMAD RSALFLGAIA GATPKSVLRA MAVPGLTLYH LKSHLQVRAC VRHAAGELSP 120 AADQLLANSV CIGSWFLTVL SSLPLLQKYR QAVSRGGNGG GGGSGSLNDR SSSSERQPAD 180 HDGDSAADEP RTIAYDGDSD GDTKEALRDS SRSMVQMQRE VQRKLQEQIE VQRHLQLRME 240 AQGRYLQSVL RRAQQVLADH SLASSPEAAT AELSELASAV DIECMSSSSP PRHHRQSAAT 300 DSCVTTTSSS EAESKAAGSK RLHTSDCTVE QPVQGKRAFN FLQRHNQADQ EEEQEEEYAG 360 AEDGSSSEID LNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04030.3 | 3e-29 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM08G16530.1 |