PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM08G12590.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | G2-like | ||||||||
Protein Properties | Length: 246aa MW: 26888.5 Da PI: 8.4777 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.5 | 1.5e-33 | 34 | 88 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av+qLGG++kAtPkti+++m+vkgLtl h+kSHLQkYRl OGLUM08G12590.4 34 KPRLRWTADLHDRFVDAVAQLGGPDKATPKTIMRTMGVKGLTLFHLKSHLQKYRL 88 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 69.8 | 4.5e-22 | 36 | 87 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav+qlGg+ t+ktI+rtmg kg+tl ++ks++qky+ OGLUM08G12590.4 36 RLRWTADLHDRFVDAVAQLGGPdkaTPKTIMRTMGvKGLTLFHLKSHLQKYR 87 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MFPGLIHHHR LLDADVGGGG GGSSAGLVLT ADPKPRLRWT ADLHDRFVDA VAQLGGPDKA 60 TPKTIMRTMG VKGLTLFHLK SHLQKYRLGK QSGKEMAEQS KDASYILGAQ SGTNLSPTVP 120 TPDLKESQEL KEALRAQMEV QRKLHEQVEV QRHVQIRMEA YQNYIDTLLE KACNIVSEQL 180 NGFSISDHDL TSAGVMLSSS DTLSPSIFHQ LSVSSISLHS PGGKSSPFAA DADLFFQKAP 240 EKRKSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13640.1 | 6e-67 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM08G12590.4 |