PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G12590.3

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 385aa MW: 42032.8 Da PI: 10.2225

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G12590.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.6	3.9e-10	195	226	22	48
T....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 22 g....tWktIartmg.kgRtlkqcksrwqkyl 48 + t+ktI+rtmg kg+tl ++ks++qky+ OGLUM08G12590.3 195 RknesTPKTIMRTMGvKGLTLFHLKSHLQKYR 226 366779*************************7 PP
2	G2-like	47.4	4.2e-15	197	227	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++ tPkti+++m+vkgLtl h+kSHLQkYRl OGLUM08G12590.3 197 NESTPKTIMRTMGVKGLTLFHLKSHLQKYRL 227 578***************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MQDAPCSGST GVAARGRSMS DKLLRSSAEE VCAPAEMAEQ GSSSAWGGSH SKQVVFAAES 60 AAEQALAAPR ALDAFTRPFR RAAVSAGWRF TIVGTRKYAF PRDLTRTSSL VMMCVILVAG 120 RNRATCSSCS FGTVRMTSSP RFTSDRSSRC RSRPPPEPAV RTPAAAAAPR LLRCFKDARR 180 ACFLAVSKKN EQGERKNEST PKTIMRTMGV KGLTLFHLKS HLQKYRLGKQ SGKEMAEQSK 240 DASYILGAQS GTNLSPTVPT PDLKESQELK EALRAQMEVQ RKLHEQVEVQ RHVQIRMEAY 300 QNYIDTLLEK ACNIVSEQLN GFSISDHDLT SAGVMLSSSD TLSPSIFHQL SVSSISLHSP 360 GGKSSPFAAD ADLFFQKAPE KRKSY

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MQDAPCSGST GVAARGRSMS DKLLRSSAEE VCAPAEMAEQ GSSSAWGGSH SKQVVFAAES  60
AAEQALAAPR ALDAFTRPFR RAAVSAGWRF TIVGTRKYAF PRDLTRTSSL VMMCVILVAG  120
RNRATCSSCS FGTVRMTSSP RFTSDRSSRC RSRPPPEPAV RTPAAAAAPR LLRCFKDARR  180
ACFLAVSKKN EQGERKNEST PKTIMRTMGV KGLTLFHLKS HLQKYRLGKQ SGKEMAEQSK  240
DASYILGAQS GTNLSPTVPT PDLKESQELK EALRAQMEVQ RKLHEQVEVQ RHVQIRMEAY  300
QNYIDTLLEK ACNIVSEQLN GFSISDHDLT SAGVMLSSSD TLSPSIFHQL SVSSISLHSP  360
GGKSSPFAAD ADLFFQKAPE KRKSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	3e-41	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G12590.3