PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G12590.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 451aa MW: 49275 Da PI: 10.2182

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G12590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.3	4.8e-10	261	292	22	48
T....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 22 g....tWktIartmg.kgRtlkqcksrwqkyl 48 + t+ktI+rtmg kg+tl ++ks++qky+ OGLUM08G12590.1 261 RknesTPKTIMRTMGvKGLTLFHLKSHLQKYR 292 366779*************************7 PP
2	G2-like	47.1	5.1e-15	263	293	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++ tPkti+++m+vkgLtl h+kSHLQkYRl OGLUM08G12590.1 263 NESTPKTIMRTMGVKGLTLFHLKSHLQKYRL 293 578***************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MDGGEGGVLR EGGEVGGEGW KRKSSLGHVA WSNLPTQRVS LDRCLGEKEL GVASPSEASR 60 GLAKERLFCF FERKQTASAA RGRSMSDKLL RSSAEEVCAP AEMAEQGSSS AWGGSHSKQV 120 VFAAESAAEQ ALAAPRALDA FTRPFRRAAV SAGWRFTIVG TRKYAFPRDL TRTSSLVMMC 180 VILVAGRNRA TCSSCSFGTV RMTSSPRFTS DRSSRCRSRP PPEPAVRTPA AAAAPRLLRC 240 FKDARRACFL AVSKKNEQGE RKNESTPKTI MRTMGVKGLT LFHLKSHLQK YRLGKQSGKE 300 MAEQSKDASY ILGAQSGTNL SPTVPTPDLK ESQELKEALR AQMEVQRKLH EQVEVQRHVQ 360 IRMEAYQNYI DTLLEKACNI VSEQLNGFSI SDHDLTSAGV MLSSSDTLSP SIFHQLSVSS 420 ISLHSPGGKS SPFAADADLF FQKAPEKRKS Y

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MDGGEGGVLR EGGEVGGEGW KRKSSLGHVA WSNLPTQRVS LDRCLGEKEL GVASPSEASR  60
GLAKERLFCF FERKQTASAA RGRSMSDKLL RSSAEEVCAP AEMAEQGSSS AWGGSHSKQV  120
VFAAESAAEQ ALAAPRALDA FTRPFRRAAV SAGWRFTIVG TRKYAFPRDL TRTSSLVMMC  180
VILVAGRNRA TCSSCSFGTV RMTSSPRFTS DRSSRCRSRP PPEPAVRTPA AAAAPRLLRC  240
FKDARRACFL AVSKKNEQGE RKNESTPKTI MRTMGVKGLT LFHLKSHLQK YRLGKQSGKE  300
MAEQSKDASY ILGAQSGTNL SPTVPTPDLK ESQELKEALR AQMEVQRKLH EQVEVQRHVQ  360
IRMEAYQNYI DTLLEKACNI VSEQLNGFSI SDHDLTSAGV MLSSSDTLSP SIFHQLSVSS  420
ISLHSPGGKS SPFAADADLF FQKAPEKRKS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	2e-40	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G12590.1