PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM08G09260.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 565aa    MW: 61570.8 Da    PI: 6.2306
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM08G09260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.3e-30244300259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       Dg+nWrKYGqK+vk+se++rsYYrCt ++C +kkkve++  d++vvei+Y+g+Hnhe
  OGLUM08G09260.1 244 GDGFNWRKYGQKQVKSSENSRSYYRCTNSNCLAKKKVEHCP-DGRVVEIIYRGTHNHE 300
                      6****************************************.***************8 PP
2WRKY100.41.1e-31411468259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      +Dgy+WrKYGqK vkg+++prsYYrCt+ gCpv+k+ve++ +d + +++tYeg+Hnh+
  OGLUM08G09260.1 411 SDGYRWRKYGQKIVKGNPNPRSYYRCTHDGCPVRKHVEKAPDDDNNIVVTYEGKHNHD 468
                      7********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    
MPDGYPVAPP GMERPAPEAA AAAAEPPGAK AEEEEEGPKD VGVKGTGKEE TEKVEAEKEM  60
EGKGKGKESM EVEEEGKEKE AKGKESMEVE EGKEKEGKGK AKEKEKETKV KVKEEGGEEK  120
DKGKVEVVEA KRRPAGVGAE TPILAVPMVA VPCFLASPAF AGHFSMSHQA ALASVTAQAQ  180
IQLQSPTTPY SEGLPSPFPI TPKAVMPLQR SPSGTEGSVR RSVLEKSASF QSRPHNHVSV  240
NMVGDGFNWR KYGQKQVKSS ENSRSYYRCT NSNCLAKKKV EHCPDGRVVE IIYRGTHNHE  300
PPQKTRFVKE RVAHITASSG DDETLQLVNN EIIESPSPGC KLEPGAVSEA SEQQLFCSSD  360
CEGDAGNKSE DDHPSTEPQP KRRIIETSTP LTPVLRTVRE QKIIVQAGKT SDGYRWRKYG  420
QKIVKGNPNP RSYYRCTHDG CPVRKHVEKA PDDDNNIVVT YEGKHNHDQP FRNNSESKDG  480
PVPMIIPAET TSEQPSTMTS TSEQKQPISL LKDGGDEPMK GKTSEIGGEK AVESAQTLIS  540
IKTNPDDMKN TLLKDTSAVV PVQNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.13e-65WRKY family protein