PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G26720.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 346aa MW: 38328.5 Da PI: 7.3551

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G26720.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.7	6.4e-34	52	106	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt+eLHerFveav+qLGG++kAtPk+i++lm+++gLtl+h+kSHLQkYRl OGLUM07G26720.1 52 KPRLKWTSELHERFVEAVNQLGGPDKATPKSIMRLMGIPGLTLYHLKSHLQKYRL 106 79****************************************************8 PP
2	Myb_DNA-binding	70.7	2.4e-22	54	105	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT e++e++v+av+qlGg+ t+k+I+r mg g+tl+++ks++qky+ OGLUM07G26720.1 54 RLKWTSELHERFVEAVNQLGGPdkaTPKSIMRLMGiPGLTLYHLKSHLQKYR 105 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MTGTEQMMYH QQQVQSDSQH LSSRPGLPPE KQFLLQGGAD SSSGLVLSTD AKPRLKWTSE 60 LHERFVEAVN QLGGPDKATP KSIMRLMGIP GLTLYHLKSH LQKYRLSKNL QSQANASRAQ 120 GVLGCSTTEI DKPCEGNGSP ASHLDLETQT NSSSMHINEA LQMQIEVQRR LNEQLEVQRH 180 LQLRIEAQGK YLQSVLEKAQ EALGTIAVAE TAATANASSS KRLQNEHTQL HHHQQQQQVG 240 DGSVDSCLTA CDCEGSHHSR SHGHRGEQDI LSIGLPPFEP AAARSGKEHH YLLFPNEPSR 300 RRSCSDERRR ERSTLQASEL DLSINGRSSS HSHRRENIDL NGAGWS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MTGTEQMMYH QQQVQSDSQH LSSRPGLPPE KQFLLQGGAD SSSGLVLSTD AKPRLKWTSE  60
LHERFVEAVN QLGGPDKATP KSIMRLMGIP GLTLYHLKSH LQKYRLSKNL QSQANASRAQ  120
GVLGCSTTEI DKPCEGNGSP ASHLDLETQT NSSSMHINEA LQMQIEVQRR LNEQLEVQRH  180
LQLRIEAQGK YLQSVLEKAQ EALGTIAVAE TAATANASSS KRLQNEHTQL HHHQQQQQVG  240
DGSVDSCLTA CDCEGSHHSR SHGHRGEQDI LSIGLPPFEP AAARSGKEHH YLLFPNEPSR  300
RRSCSDERRR ERSTLQASEL DLSINGRSSS HSHRRENIDL NGAGWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	2e-75	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G26720.1