PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G26430.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Protein Properties

Length: 911aa MW: 100069 Da PI: 7.4651

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G26430.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.7e-19	363	462	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+kvl+ sd+++ grlvlpk +ae++ ++++e++ lt++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ ++ OGLUM07G26430.1 363 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGRPLTIQDAKGKEWHFQFRFwpNNNSRMYVLE-GVTPCIQSLQLQAGDTVTFSRIE-PGG 454 99************************555567778***********99899999999.*******************887.777 PP ..EEEEE- CS B3 91 elvvkvfr 98 +lv+++++ OGLUM07G26430.1 455 KLVMGFRK 462 77877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MAGMAAAAAA LVAAKRCMNA ACGAPAPSPA GGEWRKGWPL RSGGFAVLCD KCGLAYEQLV 60 FCDIFHQKES GWRDCSFCGK RLHCGCIASK NSFDLLDSGG VQCVTCIKNS AVQSVPSPVV 120 PKLFSSQNNQ RLFGKSDDLL SGRPLETSSL MVDARNDDLT IIAKNNLPFM VKNVEAGQSS 180 KILRQKELEN GARQIKWELP TLSIGDMGRI PFLTRSQSAL ESRRDENKDP TTESTTSESL 240 SEACLNMSLG IASNGNKLEA TSTVERPMLS PTTGFPEGRE LTTALSPFQH AQRARHFLTR 300 PPRVGEGAVF DPTKDMLPHL RVARPPAEGR GRNQLLPRYW PRITDQELQQ ISGDSNSTIV 360 PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQPEGRPL TIQDAKGKEW HFQFRFWPNN 420 NSRMYVLEGV TPCIQSLQLQ AGDTVTFSRI EPGGKLVMGF RKATNTVSLP DSQISAIANG 480 SILGDTLFSS TNENLAITDK FGSRPDEGSL QFLKRGRNIG SKSRRLSMDA EEAWELKLYW 540 DEVQELLRPA PTAKPTVVMI EDYEIEEYDE PPVFAKRSIF TIRSTGEQDQ WIQCDDCSKW 600 RRLPLNVIVA SKWTCADNTI DSKSCSCSAP EELTPKELHI VLQQYEDMRR RRNSFGFKQN 660 IPEMDAVSLD AFATAAVYGD VGNQGSPSVA TTTKHPRHRP GCTCIVCIQP PSGKGPKHNP 720 ACTCNVCMTV RRRFKTLMMR KKQRQSEREE TEASKKIAWM NRDEPEGSSL SRSPQTVDTT 780 REGDVTMFDK VDINKGHIDL NFHPTAVRDK ERHGGQPRVS MVSLLEVASR PLENYMKQNG 840 LTSLAGEQGS SSTCTGAATV PQPAPVESEE RTSNNDGGRV ATAEQPESMT VDEAGDNQPD 900 KAAGDSAAAL A

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MAGMAAAAAA LVAAKRCMNA ACGAPAPSPA GGEWRKGWPL RSGGFAVLCD KCGLAYEQLV  60
FCDIFHQKES GWRDCSFCGK RLHCGCIASK NSFDLLDSGG VQCVTCIKNS AVQSVPSPVV  120
PKLFSSQNNQ RLFGKSDDLL SGRPLETSSL MVDARNDDLT IIAKNNLPFM VKNVEAGQSS  180
KILRQKELEN GARQIKWELP TLSIGDMGRI PFLTRSQSAL ESRRDENKDP TTESTTSESL  240
SEACLNMSLG IASNGNKLEA TSTVERPMLS PTTGFPEGRE LTTALSPFQH AQRARHFLTR  300
PPRVGEGAVF DPTKDMLPHL RVARPPAEGR GRNQLLPRYW PRITDQELQQ ISGDSNSTIV  360
PLFEKVLSAS DAGRIGRLVL PKACAEAYFP PISQPEGRPL TIQDAKGKEW HFQFRFWPNN  420
NSRMYVLEGV TPCIQSLQLQ AGDTVTFSRI EPGGKLVMGF RKATNTVSLP DSQISAIANG  480
SILGDTLFSS TNENLAITDK FGSRPDEGSL QFLKRGRNIG SKSRRLSMDA EEAWELKLYW  540
DEVQELLRPA PTAKPTVVMI EDYEIEEYDE PPVFAKRSIF TIRSTGEQDQ WIQCDDCSKW  600
RRLPLNVIVA SKWTCADNTI DSKSCSCSAP EELTPKELHI VLQQYEDMRR RRNSFGFKQN  660
IPEMDAVSLD AFATAAVYGD VGNQGSPSVA TTTKHPRHRP GCTCIVCIQP PSGKGPKHNP  720
ACTCNVCMTV RRRFKTLMMR KKQRQSEREE TEASKKIAWM NRDEPEGSSL SRSPQTVDTT  780
REGDVTMFDK VDINKGHIDL NFHPTAVRDK ERHGGQPRVS MVSLLEVASR PLENYMKQNG  840
LTSLAGEQGS SSTCTGAATV PQPAPVESEE RTSNNDGGRV ATAEQPESMT VDEAGDNQPD  900
KAAGDSAAAL A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	731	742	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-180	B3 family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G26430.1