PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G25800.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 320aa    MW: 33814.1 Da    PI: 7.0845
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G25800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.6e-1858106355
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  OGLUM07G25800.1  58 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 106
                      56******.**********965...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MNTRGSGSSS SSSSSQASLM AFSEPPKPAS QPSPPSSPMS ERPPSGRSRR RAQEPGRFLG  60
VRRRPWGRYA AEIRDPTTKE RHWLGTFDTA QEAALAYDRA ALSMKGAQAR TNFVYTHTAY  120
NYPPFLAPFH APPYAAAAAA PSSVQYGGGV GAAPHIGSYG HHHHHHHHHH HGHGAASGAS  180
SVGECSTMPV MVPVDPHRSS MSSSLLDMDR NGHDFLFSGA DDNSGYLSSV VPESCLRPRG  240
GGAAADHQDM RRYSDADAYG MMGLREDVDD LAQMVAGFWG GGDAADQLGA CGFPASGGAA  300
DMVASSQGSD SYSPFSFLSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.15e-38ERF family protein