PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G22660.4

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CAMTA

Protein Properties

Length: 1024aa MW: 114657 Da PI: 6.8158

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G22660.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	180.4	2.1e-56	21	137	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 l+ ++rwl+++ei++iL n++k++++ e+++rp sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fq OGLUM07G22660.4 21 LEAQNRWLRPTEICHILSNYKKFSIAPEPPNRPASGSLFLFDRKILRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQ 114 5679**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+ywlLee + +ivlvhylevk OGLUM07G22660.4 115 RRTYWLLEEGFMNIVLVHYLEVK 137 ******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1024 aa Download sequence
MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL 60 FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL 120 LEEGFMNIVL VHYLEVKGKN NFSRVASKVS AVLKKLKRVQ DYLMLIVLHA QTLSLVRASV 180 SKEKFGATDN CRASSRYHPF VEMQQPVDGV MMNNMLGVSA PRYHGEMQTT TANSDNHFAT 240 HYDIAGVFNE AGAGLRGVSK TLHDSVRFAE PYPEYSAEFM KPALYSSNAT MESNNLDDNS 300 RLETFMSEAL YTNNLTQKEA DALSAAGIMS SQAENNSYTD GIRYPLLKQS SLDLFKIEPD 360 GLKKFDSFSR WMSSELPEVA DLDIKSSSDA FWSSTETVNV ADGTSIPINE QLDAFAVSPS 420 LSQDQLFSII DVSPSYACTG SRNKVLITGT FLANKEHVEN CKWSCMFGDV EVPAEVLAHG 480 SLRCYTPVHL SGRVPFYVTC SNRVACSEVR EFEFRDSDAR QMDTSDPQTT GINEMHLHIR 540 LEKLLSLGPD DYEKYVMSDG KEKSEIINTI SSLMLDDKCL NQAVPLDEKE VSTARDQNIE 600 KLVKEKLYCW LVHKVHDEDK GPNVLGKEGQ GVIHLVAALG YDWAVRPIIT AGVKVNFRDA 660 RGWTALHWAA SCGRERTVGA LIANGAESGL LTDPTPQFPA GRTAADLASE NGHKGIAGFL 720 AESALTSHLS ALTLKESKDG NVKEICGLGG AEDFAESSSS QLAYRDSQAE SLKDSLSAVR 780 KSTQAAARIF QAFRVESFHR KKVVEYGDDD CGLSDEHTLS LVSIKNAKPG QNDGAHSAAV 840 RIQNKFRGWK GRKEFMIIRQ KIVKIQAHVR GHQVRKSYRR IVWSVGIVEK IILRWRRKRR 900 GLRGFQPVKQ LEGPSPIQQL EGPSQIQTAK EEEEDEYDYL KDGRKQAEGR LQRALARVKS 960 MTQYPEAREQ YSRIANRVTE LQEPQAMMIQ DDMQSDGAIA DGGDFMAELE ELCGDGDAPM 1020 PTIL

Sequence ? help Back to Top

Protein Sequence Length: 1024 aa Download sequence

MAEVRKYGLP NQPPDIPQIL LEAQNRWLRP TEICHILSNY KKFSIAPEPP NRPASGSLFL  60
FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL  120
LEEGFMNIVL VHYLEVKGKN NFSRVASKVS AVLKKLKRVQ DYLMLIVLHA QTLSLVRASV  180
SKEKFGATDN CRASSRYHPF VEMQQPVDGV MMNNMLGVSA PRYHGEMQTT TANSDNHFAT  240
HYDIAGVFNE AGAGLRGVSK TLHDSVRFAE PYPEYSAEFM KPALYSSNAT MESNNLDDNS  300
RLETFMSEAL YTNNLTQKEA DALSAAGIMS SQAENNSYTD GIRYPLLKQS SLDLFKIEPD  360
GLKKFDSFSR WMSSELPEVA DLDIKSSSDA FWSSTETVNV ADGTSIPINE QLDAFAVSPS  420
LSQDQLFSII DVSPSYACTG SRNKVLITGT FLANKEHVEN CKWSCMFGDV EVPAEVLAHG  480
SLRCYTPVHL SGRVPFYVTC SNRVACSEVR EFEFRDSDAR QMDTSDPQTT GINEMHLHIR  540
LEKLLSLGPD DYEKYVMSDG KEKSEIINTI SSLMLDDKCL NQAVPLDEKE VSTARDQNIE  600
KLVKEKLYCW LVHKVHDEDK GPNVLGKEGQ GVIHLVAALG YDWAVRPIIT AGVKVNFRDA  660
RGWTALHWAA SCGRERTVGA LIANGAESGL LTDPTPQFPA GRTAADLASE NGHKGIAGFL  720
AESALTSHLS ALTLKESKDG NVKEICGLGG AEDFAESSSS QLAYRDSQAE SLKDSLSAVR  780
KSTQAAARIF QAFRVESFHR KKVVEYGDDD CGLSDEHTLS LVSIKNAKPG QNDGAHSAAV  840
RIQNKFRGWK GRKEFMIIRQ KIVKIQAHVR GHQVRKSYRR IVWSVGIVEK IILRWRRKRR  900
GLRGFQPVKQ LEGPSPIQQL EGPSQIQTAK EEEEDEYDYL KDGRKQAEGR LQRALARVKS  960
MTQYPEAREQ YSRIANRVTE LQEPQAMMIQ DDMQSDGAIA DGGDFMAELE ELCGDGDAPM  1020
PTIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.3	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G22660.4