PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM07G17270.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 28311.2 Da PI: 6.294 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.4 | 7.8e-11 | 99 | 146 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRd++N++f eL +l + + +K++K++iL A++ + +L OGLUM07G17270.3 99 SKACREKVRRDKLNERFLELGAVLEPG---KTPKMDKSSILNDAIRVMAEL 146 6789**********************9...9**************998777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MASPEGSTWV FDCPLMDDLA AAAGFDAAPA GGFYWTTPAP PQAALQPPPP PQQQQQHVAP 60 ATAAPNTCAE INGSVDCEHG KEQPTNKRPR SESGTRPSSK ACREKVRRDK LNERFLELGA 120 VLEPGKTPKM DKSSILNDAI RVMAELRSEA QKLKESNESL QEKIKELKAE KNELRDEKQK 180 LKAEKESLEQ QIKFLNARPS FVPHPPVIPA TAFTAPQGQA AGQKLMMPVI GYPGFPMWQF 240 MPPSDVDTTD DTKSCPPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 1e-77 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM07G17270.3 |