PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G15440.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Dof
Protein Properties Length: 360aa    MW: 34317 Da    PI: 8.0653
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G15440.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.85.7e-3947106362
           zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                       +al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+s+
  OGLUM07G15440.1  47 AEALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRSR 106
                      57899****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MAGAGGAATA AAGGGGGGGV AAGRSGGGGG GGGAAAAAGA GAPDPRAEAL RCPRCDSANT  60
KFCYYNNYSL SQPRHFCKAC KRYWTRGGTL RNVPVGGGCR KNKRSRSGGA APGGGVGRGG  120
PGGGAAAAVS SAGGGAAGTS PASSLALPQP GSLPSLSSAL GLTGGTSLAS LLLGSGGSGG  180
DHLGLFQAMQ SVVSDAAAFE MHQQHQSQVD HLLGLGYGAA GAQIQAAKPW LHDGGATGGL  240
LDGFYAPLLS GSIVPGLEEL QVKAEATTGD HQQKSSAAAA GEQSWDLPTP SSSNVEASII  300
ASDALMAAAA ASMNPAVSAA AASTAPSAQS LLYWGNGGIG AAAAAWPDLA NCGSSIATLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.17e-34Dof family protein