PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G14330.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family C3H
Protein Properties Length: 386aa    MW: 39823.4 Da    PI: 7.0929
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G14330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.11.4e-08321345227
                      -S---SGGGGTS--TTTTT-SS-SSS CS
          zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                      kt+lC+ +++ G C+ G+ C+++Hg+
  OGLUM07G14330.1 321 KTALCSKWRK-GRCHNGAACRYSHGE 345
                      8*********.*************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MADPNGRRRL PTGDPDQANA SPSRRVSAVD GVTGGEGGPT YSHFPPGAYE PTDVAYGIRD  60
AANDERARAR ARHDQGGGAH DHHHDRPRQD QRGEAHLHDL PGEKSEVPDV GPSDQQGKEA  120
SDTDMAPLAA LAKRSYDVNF PPLHEHRAAP VPAPAPASAP APAGTMGSSS AQVQGDGAPD  180
NHDHDPRHLP RQDQRGGAHP DDLHGEKTIG SGSDILDDSK RGMINAGPQH GRITTSNGGS  240
GSGSDKGKGV SYAGDKPASS SSSSSSAGQQ GSDTDKTPSA AAASSYAVNF PPLLPAPAPV  300
PAPAPAPAVA GAMGVANAHH KTALCSKWRK GRCHNGAACR YSHGEEEQRI VPEMRVGGGG  360
RPCPELAAAK GWCRYGLNCK YCHGGV