PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM07G14330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | C3H | ||||||||
Protein Properties | Length: 386aa MW: 39823.4 Da PI: 7.0929 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 26.1 | 1.4e-08 | 321 | 345 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+lC+ +++ G C+ G+ C+++Hg+ OGLUM07G14330.1 321 KTALCSKWRK-GRCHNGAACRYSHGE 345 8*********.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MADPNGRRRL PTGDPDQANA SPSRRVSAVD GVTGGEGGPT YSHFPPGAYE PTDVAYGIRD 60 AANDERARAR ARHDQGGGAH DHHHDRPRQD QRGEAHLHDL PGEKSEVPDV GPSDQQGKEA 120 SDTDMAPLAA LAKRSYDVNF PPLHEHRAAP VPAPAPASAP APAGTMGSSS AQVQGDGAPD 180 NHDHDPRHLP RQDQRGGAHP DDLHGEKTIG SGSDILDDSK RGMINAGPQH GRITTSNGGS 240 GSGSDKGKGV SYAGDKPASS SSSSSSAGQQ GSDTDKTPSA AAASSYAVNF PPLLPAPAPV 300 PAPAPAPAVA GAMGVANAHH KTALCSKWRK GRCHNGAACR YSHGEEEQRI VPEMRVGGGG 360 RPCPELAAAK GWCRYGLNCK YCHGGV |
Link Out ? help Back to Top | |
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Ensembl | OGLUM07G14330.1 |