PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM07G10880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 240aa MW: 25534.2 Da PI: 9.8115 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.9 | 4.3e-17 | 78 | 127 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrd + ng +r+++g+f++ae Aa a+++a+++ +g OGLUM07G10880.1 78 FIGVRRRP-WGRFAAEIRDSTRNG--ARVWIGTFDSAEAAAMAYDQAALSARG 127 57******.**********44465..***********************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 240 aa Download sequence |
MAEHFSHTGM YIGYTADAAA SFSSSSSSSS SSSSSEMLRF DTGWPDETPA PSSVAGRRRS 60 AGGDHRQGRG QTEAAAAFIG VRRRPWGRFA AEIRDSTRNG ARVWIGTFDS AEAAAMAYDQ 120 AALSARGAAA ALNFPVERVR ESLHALSLGA AGGSPVLALK RRHSKRKRRK KAELLAAAAA 180 TAATANATPQ TRRISKSTEL TTATTDEQKR FVVELEDLGA EYLEELLWLS EINGGSDPAD |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 161 | 167 | RRHSKRK |
2 | 165 | 170 | KRKRRK |
3 | 165 | 171 | KRKRRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-22 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM07G10880.1 |