PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM07G07150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB | ||||||||
Protein Properties | Length: 462aa MW: 49712.5 Da PI: 5.8987 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51 | 3.3e-16 | 108 | 154 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEde l + v+ +G + W+ Ia+ ++ gR +kqc++rw ++l OGLUM07G07150.1 108 KGGWTREEDEVLRQMVRHHGDRKWAEIAKSLP-GRVGKQCRERWTNHL 154 688*****************************.************996 PP | |||||||
2 | Myb_DNA-binding | 54.1 | 3.5e-17 | 162 | 202 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd +l++a++ +G+ W++Ia++++ gR+++ +k++w+ OGLUM07G07150.1 162 IWTEEEDRILIEAHQTYGNS-WSAIAKRLP-GRSENTIKNHWN 202 6*****************99.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence |
MAAAGNSFLN QELVKAADGV SDWHLPSSSH GGTCHTNTRA APITVGVPDL GCPVSSIGVA 60 TSSSLTPKEG LATASYNSVV AFPVGATMVP QQQQTQAAGS NDNPGLVKGG WTREEDEVLR 120 QMVRHHGDRK WAEIAKSLPG RVGKQCRERW TNHLHPDIKK DIWTEEEDRI LIEAHQTYGN 180 SWSAIAKRLP GRSENTIKNH WNATKRSLNS KRRLRKKNSE QTVPGQPSLL ENYIRSCQHM 240 LPSEIAPPPP APPAPFDISR YGNSGVIGAS PTLPVVQEPG TSTPPGLVMF LDLLNQAIPH 300 PPQPETMDLF NMTPEVSHLN TSGYCLQLDA GGNLSYGQLP APALVQPHGI STQELQDTPH 360 LSLYYPLSSF AGSHTDGTVE FDHQLSNPDG GHYGEEAGPS SVAAGGSANG MDDNDVVQMA 420 SNQFMMPSED EGELMMAAGN SFLNQELLMV VNIMRSHGGA SY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 7e-48 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM07G07150.1 |