PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G01740.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 357aa MW: 38734.5 Da PI: 7.0002

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G01740.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30	9.1e-10	283	318	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ OGLUM07G01740.1 283 YKWPYPSETEKIALAESTGLDQKQINNWFINQRKRH 318 4679*****************************885 PP
2	ELK	35.7	1.9e-12	238	259	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLl+KYsgyL+sL+qEFs OGLUM07G01740.1 238 ELKFQLLKKYSGYLSSLRQEFS 259 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MDQSFGNLGG GGAGGSGKAA ASSFLQLPLS TAAAATAYYG TPLALHQAAA AAGPSQYHGH 60 GHPHHGGGHH HSKHGGAGGG EISAAEAESI KAKIMAHPQY SALLAAYLDC QKVGAPPEVL 120 ERLTATAAKL DARPPGRHDA RDPELDQFME AYCNMLAKYR EELTRPIDEA MEFLKRVESQ 180 LDTIAGGAHG GSGGGAGSAR LLLADGKSEC VGSSEDDMDP SGRENEPPEI DPRAEDKELK 240 FQLLKKYSGY LSSLRQEFSK KKKKGKLPKE ARQKLLHWWE LHYKWPYPSE TEKIALAEST 300 GLDQKQINNW FINQRKRHWK PSEDMPFVMM EGFHPQNAAA LYMDGPFMAD GMYRLGS

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MDQSFGNLGG GGAGGSGKAA ASSFLQLPLS TAAAATAYYG TPLALHQAAA AAGPSQYHGH  60
GHPHHGGGHH HSKHGGAGGG EISAAEAESI KAKIMAHPQY SALLAAYLDC QKVGAPPEVL  120
ERLTATAAKL DARPPGRHDA RDPELDQFME AYCNMLAKYR EELTRPIDEA MEFLKRVESQ  180
LDTIAGGAHG GSGGGAGSAR LLLADGKSEC VGSSEDDMDP SGRENEPPEI DPRAEDKELK  240
FQLLKKYSGY LSSLRQEFSK KKKKGKLPKE ARQKLLHWWE LHYKWPYPSE TEKIALAEST  300
GLDQKQINNW FINQRKRHWK PSEDMPFVMM EGFHPQNAAA LYMDGPFMAD GMYRLGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-103	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G01740.1