PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G01230.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 357aa MW: 38312.2 Da PI: 6.9224

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G01230.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.4	2.8e-32	230	285	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH++Fv a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ OGLUM07G01230.1 230 KTRRCWSPDLHRKFVAALQQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 285 68****************************************************97 PP
2	Myb_DNA-binding	44.2	4.6e-14	232	283	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v a +qlGg+ t+k I + m g+t ++ks++qky+ OGLUM07G01230.1 232 RRCWSPDLHRKFVAALQQLGGPqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 283 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGLDVGEIGV GAADLSLDLK MFAAKSFGRV RGKDTTTTAM GDCIRRLEEE MGKIEVFRRE 60 LPLCVRLLAD VIDVMKEEVE KKGGDRKEDE EDAAGDKSNW MSTAQLWTGN SGGPDAAAAD 120 PEKQDKVRIS SEAKSNGGAF VGSGAPAFAR PKQSLMRKED MAYDVRMPDL SLLSPPASAA 180 AADESRRQVV GFAQAAARAA AMAASGPALS LQPQPQPAAA QQQQQQQARK TRRCWSPDLH 240 RKFVAALQQL GGPQVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHNRPRV PSSTIVNQPI 300 VLMQGLCYIP QEQSSSQSGS PEGPLHFSGS GMAGGGSSAA TVSCEEEDGR SESYGWK

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGLDVGEIGV GAADLSLDLK MFAAKSFGRV RGKDTTTTAM GDCIRRLEEE MGKIEVFRRE  60
LPLCVRLLAD VIDVMKEEVE KKGGDRKEDE EDAAGDKSNW MSTAQLWTGN SGGPDAAAAD  120
PEKQDKVRIS SEAKSNGGAF VGSGAPAFAR PKQSLMRKED MAYDVRMPDL SLLSPPASAA  180
AADESRRQVV GFAQAAARAA AMAASGPALS LQPQPQPAAA QQQQQQQARK TRRCWSPDLH  240
RKFVAALQQL GGPQVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHNRPRV PSSTIVNQPI  300
VLMQGLCYIP QEQSSSQSGS PEGPLHFSGS GMAGGGSSAA TVSCEEEDGR SESYGWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	3e-31	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G01230.1