PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G28970.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 272aa MW: 29217.8 Da PI: 6.2206

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G28970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.7	1.2e-08	98	142	8	52
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r NR A r++R++Kka ++ Lee+v L a N++L k+l++ OGLUM06G28970.1 98 KRPSGNRAAVRKYREKKKAHTASLEEEVVHLRALNQQLMKKLQNH 142 55566**********************************999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MDDGDLDFSN PDTFLCPAVG GADPDGSCSM DSYFDDILKD TEHHACTHTH TCNPPVHDLS 60 HTHTCVHVHT KIVSAPSDTP SDAAETAESP TENNASKKRP SGNRAAVRKY REKKKAHTAS 120 LEEEVVHLRA LNQQLMKKLQ NHATLEAEVS RLRCLLVDIR GRIEGEIGAF PYQRPVKNID 180 LVSSVDQGSY LGGAQVMNSC DFRCADQMYC SPGMQVRTMG EDGAVSGQVL GQGACDIASI 240 QCQGAKSGSA KLPVCGAMGT MPVGCMPNSE KK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35040.1	5e-68	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G28970.1