PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM06G19630.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 513aa    MW: 56268.6 Da    PI: 9.5824
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM06G19630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.93.5e-31542281128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 
                      lp+G++F+Ptd+el+ e+L++kv+          ++++  +i+   +i++++P++Lp  v+++  + +fF++ +k+y+tg+rk+r+        
  OGLUM06G19630.1  54 LPAGVKFDPTDQELI-EHLEAKVQPGGeaaahplIDEFIpTIEGEdGICYTHPEKLP-GVSKDGLSRHFFHRPSKAYTTGTRKRRKiqppaaaa 145
                      799************.99*****988856665543333333766646**********.556667799******************88******* PP

              NAM  78 ...............................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                                      ++ +W++tgk+++v+  +g++ g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  OGLUM06G19630.1 146 ssgggggnassssaaaaavarhghqqqqqqqRSETRWHKTGKTRAVVG-GGRQRGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 228
                      **************************9998755789***********9.99************5547999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MDGVVTEDQA GGGGGGHRRL IGSRIEEHRK YMSEESCCPR CGHKIDRKLD WVGLPAGVKF  60
DPTDQELIEH LEAKVQPGGE AAAHPLIDEF IPTIEGEDGI CYTHPEKLPG VSKDGLSRHF  120
FHRPSKAYTT GTRKRRKIQP PAAAASSGGG GGNASSSSAA AAAVARHGHQ QQQQQQRSET  180
RWHKTGKTRA VVGGGRQRGC KKILVLYTNF GKHRKPEKTN WVMHQYHLGE AEEERDGELV  240
VSKIFYQTQP RQCAAADAAA TASAYRRTTS GRDRAAAAAA AAAAAAPMAS ANVSVAAFHG  300
GAAGIDEFSF AQFRSSFEEA GMGASSSDHQ SAMVDQRRQQ QQHDDDEHDH RRGGGGHHYV  360
GQQQSVAATF HVVSSPADPI ARLMSPPPAH QGTVMLRQPE PPYIYHHQED ERPHQPRKFD  420
GRSTSGSGLE EVIMGCTSRR SKGGETSGGK DGTEWQYPSF WPSDSQDHHG WKFHLSAQIY  480
MCKETKMILK QSKRERQKKK KERKNKGDIT RKI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1495501ERQKKKK
2496502RQKKKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-100NAC family protein