PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G18870.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 528aa MW: 56875.7 Da PI: 6.615

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G18870.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.8	1.8e-31	125	178	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ OGLUM06G18870.1 125 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 178 8****************************************************7 PP
2	Myb_DNA-binding	47.9	3e-15	126	177	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ OGLUM06G18870.1 126 RLRWTPDLHMAFVHAVERLGGQeraTPKLVLQMMNvRGLSIAHVKSHLQMYR 177 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MGEVKEKEVV EIFEHDHDNK IRSPENSVPP AMVLDLNEGF GEGSEEGGVG EDGDEEDDDE 60 DDDDDDDGGS TSEVAGGGRS SSNNSSTNHN SGSDKDHDMN SSSSKADGGG DRVPTVRQYN 120 RSKLPRLRWT PDLHMAFVHA VERLGGQERA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK 180 LDHESGHERG AISSVFSPME FHMRRGDHRF HHHDMFFQRA AAAGVSPFSS RMLHENGGGF 240 FASRNPGLPE SSRLYGLFQR RQQAPMQTFD FKNCNNFSRN QEWAFNQQHA AARAAGAVNG 300 HGPAKGLIHE MIFRKEGKPT SHLFDVRDAI ASTRVTSATT AAAADHRLDG AGKAGNFDWI 360 GSSSSRPLTR TMSAAAAATM GDHHHLRWRG GAACSGAALG SLLERAKTKA TEAMRLETPV 420 KMTAAAVAAE EINGRTPDLQ LSLSPNAGDH RSAGKKRKFL SEQEVDSDKQ QLPLTLSLSL 480 RGGGDNGGGG GGEAAGRLEE EMTGSSSSKK AALGLSTLDL TMSIKALE

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MGEVKEKEVV EIFEHDHDNK IRSPENSVPP AMVLDLNEGF GEGSEEGGVG EDGDEEDDDE  60
DDDDDDDGGS TSEVAGGGRS SSNNSSTNHN SGSDKDHDMN SSSSKADGGG DRVPTVRQYN  120
RSKLPRLRWT PDLHMAFVHA VERLGGQERA TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK  180
LDHESGHERG AISSVFSPME FHMRRGDHRF HHHDMFFQRA AAAGVSPFSS RMLHENGGGF  240
FASRNPGLPE SSRLYGLFQR RQQAPMQTFD FKNCNNFSRN QEWAFNQQHA AARAAGAVNG  300
HGPAKGLIHE MIFRKEGKPT SHLFDVRDAI ASTRVTSATT AAAADHRLDG AGKAGNFDWI  360
GSSSSRPLTR TMSAAAAATM GDHHHLRWRG GAACSGAALG SLLERAKTKA TEAMRLETPV  420
KMTAAAVAAE EINGRTPDLQ LSLSPNAGDH RSAGKKRKFL SEQEVDSDKQ QLPLTLSLSL  480
RGGGDNGGGG GGEAAGRLEE EMTGSSSSKK AALGLSTLDL TMSIKALE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-34	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G18870.1