PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM06G16020.6
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GRAS
Protein Properties Length: 137aa    MW: 14330.3 Da    PI: 6.3529
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM06G16020.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS29.87.2e-103384281332
             GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332
                      ++   Er+ll++e + vvacega+ +erhe++++W +++e+  +++v ls++
  OGLUM06G16020.6  33 QAPREERVLLREETRGVVACEGAKLVERHERARHWAAWMEADDMEQVGLSYS 84 
                      555679*******************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MDHVRNSALA ALEGGVAGNK SVAGAGAAPG GAQAPREERV LLREETRGVV ACEGAKLVER  60
HERARHWAAW MEADDMEQVG LSYSGAMHGG EEAATELQVG GAVRPWLLIL LAHEAALRRL  120
RVAAGAVAPP PRSVIDA