PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G11860.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 286aa MW: 28647.7 Da PI: 7.4335

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G11860.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.6	2.8e-38	26	82	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++++cprCds+ntkfCyynny+lsqPr+fCkaCrryWtkGG lrnvPvGgg+rk k+ OGLUM06G11860.1 26 EEVRCPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGGCRKPKR 82 5789**************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MQEFHPVPGL AGRLFGGAAA AAVAVEEVRC PRCDSSNTKF CYYNNYNLSQ PRHFCKACRR 60 YWTKGGLLRN VPVGGGCRKP KRPAPPPSSS FTGGGGGGGC GHRDSKSARS AGGAGDGSGS 120 TASATATPAA APASSNTLSA AVSQPSSVDA LSPPPAPMFA DQATAFASLF APPPPPPSQA 180 LPAFASFTAQ PKAEEDVADA PALAATEQHR SSSAASFAAH SISPPFAAAR SSDGPAAAAA 240 AAAADWAPPT AVLDAGMFDL AGAIGGDTSY WNAASWTDHD GTIYLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	3e-29	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G11860.1