PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G07500.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 336aa MW: 36038.3 Da PI: 6.1356

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G07500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.1	4.4e-14	244	298	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +r+rr++kNRe+A rsR+RK+a+i eLe +v++L+++ +L+ ++ ++++k k+e OGLUM06G07500.1 244 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQKAELQ---KKQVEMIQKQKDE 298 79*************************************998...5555555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MELPADESAL ARQGSIYSLT FDEFQSALGS AGKDFGSMNM DELLRNIWTA EESQAIAPAA 60 AAASAAAVVG DAQQQQQPIQ RQGSLTLPRT LSQKTVDEVW RDIMGLGGDD DEDPAAAAAA 120 AAPAQRQPTL GEMTLEEFLV RAGVVREDMG QTIVLPPQAQ ALFPGSNVVA PAMQLANGML 180 PGVVGVAPGA AAAMTVAAPA TPVVLNGLGK VEGGDLSSLS PVPYPFDTAL RVRKGPTVEK 240 VVERRQRRMI KNRESAARSR ARKQAYIMEL EAEVAKLKEQ KAELQKKQVE MIQKQKDEVM 300 ERITQQLGPK AKRFCLRRTL TGPCLLDGRM LASITH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-40	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G07500.1