PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM06G07430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 69aa MW: 7332.43 Da PI: 9.1276 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.8 | 2.6e-05 | 4 | 30 | 23 | 54 |
HHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 23 LrellPk.askapskKlsKaeiLekAveYIksL 54 L++l+P a +l+ a++Le+A++Y+k L OGLUM06G07430.1 4 LQRLVPGgA------RLDTASMLEEAIRYVKFL 30 777777744......9***************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 69 aa Download sequence |
MRALQRLVPG GARLDTASML EEAIRYVKFL KGHVQSLERA AAALHMHGGH AAAAGFAGDA 60 VYSCPSYYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 5e-14 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM06G07430.1 |