PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM06G06550.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 209aa MW: 23044.6 Da PI: 4.7673 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.1 | 1.9e-17 | 15 | 64 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++kGVr + +g+WvAeIr p++ rkr++lg+++++e+Aa+a +aa +l+g OGLUM06G06550.1 15 RHKGVRLRQ-WGKWVAEIRLPNS---RKRIWLGSYDSPEKAARAFDAAFICLRG 64 68****998.**********933...5*********************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MQANTTQPAP EKERRHKGVR LRQWGKWVAE IRLPNSRKRI WLGSYDSPEK AARAFDAAFI 60 CLRGGEAIAG LNFPESPPAV VARTTDPREV LAFATSHANQ LLLLDAAIAQ EEEAHSFKKE 120 EEAQVEEKTA EESSDVVRAN AAPPPPVQVA GGSFDWSQLP LYSPTTTPAA EHWEEDNVEG 180 DIPVCSEMSV ETSSNSRYIG VVFQMHSYG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74930.1 | 4e-32 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM06G06550.1 |