PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM06G00450.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family MIKC_MADS
Protein Properties Length: 215aa    MW: 24485.1 Da    PI: 10.3689
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM06G00450.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.19.6e-281968251
                     ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
           SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                     rie++++rqvtfskRr+g+lKKA+ELSvLCdaeva+++fs++g+++ ++s
  OGLUM06G00450.1 19 RIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPRGRFFHFAS 68
                     8*********************************************9986 PP

2K-box57.94.4e-2092179996
            K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                        e + ++++ +++ L  ei++ +   R+++G++Les+sl+eL+ Le q+eksl++iR +K++ l+++i++lq++ek l+een  L  
  OGLUM06G00450.1  92 PRELTVKNMKSQSETLAMEIDTVEAYTRKMQGKNLESCSLQELHGLEMQMEKSLSSIRLQKQKKLMDKISQLQQQEKILSEENALLLD 179
                      5667789****************************************************************************98865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MAAAGGQQRR RGGRREMRRI EDTTRRQVTF SKRRKGLLKK ASELSVLCDA EVALLVFSPR  60
GRFFHFASAP SLEGTIDRYI SHTQEAPANK KPRELTVKNM KSQSETLAME IDTVEAYTRK  120
MQGKNLESCS LQELHGLEMQ MEKSLSSIRL QKQKKLMDKI SQLQQQEKIL SEENALLLDQ  180
GKVQHAPIGA PAREMNQNQH VQDIDVDTEL VIGRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.14e-46MIKC_MADS family protein