PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G27920.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 286aa MW: 30384 Da PI: 10.2771

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G27920.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	69.4	5.5e-22	151	213	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkre+rkq+NRe+ArrsR+RK+ae+e L++ v++L+aeN++L++e+++l++ ++kl+ e+ OGLUM05G27920.2 151 ERELKREKRKQSNRESARRSRLRKQAETEDLATQVESLTAENTSLRSEISRLSESSEKLRLEN 213 89*********************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MANPLSMEPA KSASSKEKGS NKKLKEVDGA AVSTGSGDSK KTMTSSGDYS AEGSSDVNDL 60 KVGKTGRKRR LDDGAGAETS AAAKMENALP PSHILGSTAV LPNHSFPAQV IRPSATNVAN 120 SRALGTPISP LPGVIIPSHT GVSTELLIKD ERELKREKRK QSNRESARRS RLRKQAETED 180 LATQVESLTA ENTSLRSEIS RLSESSEKLR LENSALMGKL KDPAASTQAE TSLQKTTTAS 240 SPRVVENFLS MIDNTNKTSV RHTEHAEPKL RQLLGSGPAT DVVAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	168	174	RRSRLRK
2	168	175	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.2	4e-13	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G27920.2