PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G27920.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 380aa MW: 40422.6 Da PI: 9.6898

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G27920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.8	8.8e-22	245	307	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkre+rkq+NRe+ArrsR+RK+ae+e L++ v++L+aeN++L++e+++l++ ++kl+ e+ OGLUM05G27920.1 245 ERELKREKRKQSNRESARRSRLRKQAETEDLATQVESLTAENTSLRSEISRLSESSEKLRLEN 307 89*********************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MAHDEAVATQ KTGKTTSPPK DQPTPCPFPD WSAVQAYYGP GVLPPTYFAP AIAPGHAPPP 60 YMWGPQPIMP PPFGTPYAAM YPHGGAYPHP LMPMMANPLS MEPAKSASSK EKGSNKKLKE 120 VDGAAVSTGS GDSKKTMTSS GDYSAEGSSD VNDLKVGKTG RKRRLDDGAG AETSAAAKME 180 NALPPSHILG STAVLPNHSF PAQVIRPSAT NVANSRALGT PISPLPGVII PSHTGVSTEL 240 LIKDERELKR EKRKQSNRES ARRSRLRKQA ETEDLATQVE SLTAENTSLR SEISRLSESS 300 EKLRLENSAL MGKLKDPAAS TQAETSLQKT TTASSPRVVE NFLSMIDNTN KTSVRHTEHA 360 EPKLRQLLGS GPATDVVAAS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MAHDEAVATQ KTGKTTSPPK DQPTPCPFPD WSAVQAYYGP GVLPPTYFAP AIAPGHAPPP  60
YMWGPQPIMP PPFGTPYAAM YPHGGAYPHP LMPMMANPLS MEPAKSASSK EKGSNKKLKE  120
VDGAAVSTGS GDSKKTMTSS GDYSAEGSSD VNDLKVGKTG RKRRLDDGAG AETSAAAKME  180
NALPPSHILG STAVLPNHSF PAQVIRPSAT NVANSRALGT PISPLPGVII PSHTGVSTEL  240
LIKDERELKR EKRKQSNRES ARRSRLRKQA ETEDLATQVE SLTAENTSLR SEISRLSESS  300
EKLRLENSAL MGKLKDPAAS TQAETSLQKT TTASSPRVVE NFLSMIDNTN KTSVRHTEHA  360
EPKLRQLLGS GPATDVVAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	262	268	RRSRLRK
2	262	269	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	4e-40	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G27920.1