PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G24010.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

VOZ

Protein Properties

Length: 657aa MW: 71602 Da PI: 5.3409

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G24010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	420.1	3.8e-129	324	541	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 p+ps++lgpkcalwdc rp++gs+++q+yc+ +ha laln+ gl+gt+pv+rp+gidlkdg+lfaalsakvqgk+vgip+cegaat+kspwna+ OGLUM05G24010.1 324 PSPSQYLGPKCALWDCGRPVRGSDECQHYCNPYHAGLALNDdGLLGTRPVMRPRGIDLKDGPLFAALSAKVQGKNVGIPVCEGAATTKSPWNAP 417 89************************************9799********************************************** PP VOZ 94 elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187 elfdlsllege++rewlffd+prraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpss++ewhl+eye+n++dalalyrle+ OGLUM05G24010.1 418 ELFDLSLLEGESLREWLFFDTPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSNYEWHLFEYETNDSDALALYRLEY 511 ****************************************************************************************** PP VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217 k++d+k+s+k+k+++++l+++q++++rl+a OGLUM05G24010.1 512 KSSDTKRSVKSKLASSPLSEIQQQMVRLSA 541 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MVGDPAAGGD GGRGSSGGKG SSRSSSRHQQ FRNLAKTRVD DLQEMFSGLQ SARKESRSAD 60 AALLEEQVHH MLREWRAELN VPSPASSLQA IPPNPSFPPS SFTCANSQSQ GNNREASDPP 120 SETLRLLQLA GAEEEEDDAT SKLVMPRSPM PMQSSHEGHN LSPVLQGGTM AGGAAELMVP 180 RSPLQQMPSS HQSHGHGQDG GQNLQGEAVM GCTAATAAPH LGQGMQGDCG GMAGVTNAMF 240 HDQLYYIDHE LNIDDFLQDD DYKINLPGSN PDGPNTMQGI GQLEQQYNLP LDLPPNSFVD 300 ANNSAQSSGD VFFHMSDLLT TMCPSPSQYL GPKCALWDCG RPVRGSDECQ HYCNPYHAGL 360 ALNDDGLLGT RPVMRPRGID LKDGPLFAAL SAKVQGKNVG IPVCEGAATT KSPWNAPELF 420 DLSLLEGESL REWLFFDTPR RAFDSGNRKQ RSLPDYNGRG WHESRKQVMK DFGGLKRSYY 480 MDPQPSSNYE WHLFEYETND SDALALYRLE YKSSDTKRSV KSKLASSPLS EIQQQMVRLS 540 ADSPVESKRT ARSRAKANQK DNNSNAYPAL NTPVQVSASN AHQTMSVNTP DQVNVSNAYQ 600 TMPLNTSNQP GPSNAYHAAS QMDQMTFLDG SVVYGPHLPY GYSTERSDFY WNPSDGT

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MVGDPAAGGD GGRGSSGGKG SSRSSSRHQQ FRNLAKTRVD DLQEMFSGLQ SARKESRSAD  60
AALLEEQVHH MLREWRAELN VPSPASSLQA IPPNPSFPPS SFTCANSQSQ GNNREASDPP  120
SETLRLLQLA GAEEEEDDAT SKLVMPRSPM PMQSSHEGHN LSPVLQGGTM AGGAAELMVP  180
RSPLQQMPSS HQSHGHGQDG GQNLQGEAVM GCTAATAAPH LGQGMQGDCG GMAGVTNAMF  240
HDQLYYIDHE LNIDDFLQDD DYKINLPGSN PDGPNTMQGI GQLEQQYNLP LDLPPNSFVD  300
ANNSAQSSGD VFFHMSDLLT TMCPSPSQYL GPKCALWDCG RPVRGSDECQ HYCNPYHAGL  360
ALNDDGLLGT RPVMRPRGID LKDGPLFAAL SAKVQGKNVG IPVCEGAATT KSPWNAPELF  420
DLSLLEGESL REWLFFDTPR RAFDSGNRKQ RSLPDYNGRG WHESRKQVMK DFGGLKRSYY  480
MDPQPSSNYE WHLFEYETND SDALALYRLE YKSSDTKRSV KSKLASSPLS EIQQQMVRLS  540
ADSPVESKRT ARSRAKANQK DNNSNAYPAL NTPVQVSASN AHQTMSVNTP DQVNVSNAYQ  600
TMPLNTSNQP GPSNAYHAAS QMDQMTFLDG SVVYGPHLPY GYSTERSDFY WNPSDGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-110	VOZ family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G24010.1