PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G21510.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 302aa    MW: 32441 Da    PI: 4.8827
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G21510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.31.8e-24109168258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                      +D + WrKYGqKe+k+s++pr YYrC+++   gC+++k+v++s+++p++ ++tY geH +
  OGLUM05G21510.1 109 HDNFLWRKYGQKEIKNSKYPRFYYRCSYRddhGCTATKQVQQSEDNPSLYVVTYFGEHFC 168
                      69**************************99999*************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MARTNAASRH VAKGRKAAAH LHSLLGQRLP AAAGSPSSST LHGLLVLTEQ ILRCFDRALA  60
ALHGGAAGTW DDDAAGSGRK CKPERGEVGT RAAAASSKRV RVEKKGTTHD NFLWRKYGQK  120
EIKNSKYPRF YYRCSYRDDH GCTATKQVQQ SEDNPSLYVV TYFGEHFCGR VADVDGGPVV  180
AGDDSEESEE LMVISFGSSG GAAAMGGASA AYPWPCCGED VKNSGASQPW SLPDWEGVPP  240
LTASVAEELI EESTPEPELM DLISSPDLEY SLLDLELGES SFGVDGFINF DELSVYSIDN  300
AR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.14e-22WRKY family protein