PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G21470.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 321aa    MW: 34059.8 Da    PI: 4.7065
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G21470.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.79.6e-23123185258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT...EEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk...vveitYegeHnh 58 
                      +D + WrKYGqKe+k+s++pr YYrC+++   gC+++k+v++s++d +   v +itY geH +
  OGLUM05G21470.1 123 HDNFLWRKYGQKEIKNSKHPRLYYRCSYRddhGCTATKQVQQSEDDDTaspVYVITYFGEHFC 185
                      79**************************99999**********998763336799******76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MVRATALAAT AGESSAASAS QLVAEGRRSA ARLHALLCRQ QAAAGSSSST LHGCPMALTE  60
QILCCFDRAI AALHGGAGAG CREDDDGHAA VRGGKCKPER GSAGARAAAS SKRIRVEKKA  120
TMHDNFLWRK YGQKEIKNSK HPRLYYRCSY RDDHGCTATK QVQQSEDDDT ASPVYVITYF  180
GEHFCGRVAD VGGPVVAGDD GEESEELMVI SFGSSAAAAA AATGGASAAY PWPCCGEDAK  240
NRGPSKTWSL PDWEEVPPLT ANVAEELIEE ESTPEPELMG LISSPDLEYS LLDLELGESS  300
FGIDGFINFD ELSVYSIDNA R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.15e-18WRKY family protein