PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G19350.3

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 574aa MW: 63517.9 Da PI: 9.6539

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G19350.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.7	9.3e-12	259	306	4	48
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeaeNkaLkke 48 k err+++NReAAr+sR+RKka++++Le+ + +++e+e ++ +++ OGLUM05G19350.3 259 AKTERRLAQNREAARKSRLRKKAYVQQLETsriRLQQIEQELQRARSQ 306 699*************************97222444555444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MGLRVAYWPK GLYLNASSPA TRIVSRSSRP SAAVAGGRRR PLPLKKGGNN TLNIRPLPPL 60 AATESTARLL SSTAGGVRLH RSHGKSRIGL QYKSQRVEAK KSELQPAAAA YFGELEKALI 120 HGTSAGAGVD HGMIQSDAYT EPAGYLAARP PTLEIFPSWP MSHLQEPYSN SQSVGSTTDS 180 SSAQNTMSQA ELVSPASMRS DSGQEQQQQE VLMVTIDDYN YKQGLGAAIA TAPSFQQHAG 240 GLDMRKHGST RKDGKLLDAK TERRLAQNRE AARKSRLRKK AYVQQLETSR IRLQQIEQEL 300 QRARSQVPTL RKPHKIATSN NTILTKGAVM FDMEYTRWID DDSKCMAELQ GALQAQLPDG 360 NLGAIVEECM RHYDELFHLR AVLASSDVFH LMTGMWAAPA ERCFLWMAGF RPSEILKMLI 420 PQLDPLTEQQ LMGMCSLQQS SEQTEEALAQ GLHQLHQSLA DAVGGGPLND GADVANYTGL 480 MALALGRLEN LESFYRQADN LRQETLHHMR RILTTRQTAR CFLSIGEYNR RLRALSSLWA 540 SRPRENFIAT ENVSPTGTEF QVIQQSQQNQ FSGF

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MGLRVAYWPK GLYLNASSPA TRIVSRSSRP SAAVAGGRRR PLPLKKGGNN TLNIRPLPPL  60
AATESTARLL SSTAGGVRLH RSHGKSRIGL QYKSQRVEAK KSELQPAAAA YFGELEKALI  120
HGTSAGAGVD HGMIQSDAYT EPAGYLAARP PTLEIFPSWP MSHLQEPYSN SQSVGSTTDS  180
SSAQNTMSQA ELVSPASMRS DSGQEQQQQE VLMVTIDDYN YKQGLGAAIA TAPSFQQHAG  240
GLDMRKHGST RKDGKLLDAK TERRLAQNRE AARKSRLRKK AYVQQLETSR IRLQQIEQEL  300
QRARSQVPTL RKPHKIATSN NTILTKGAVM FDMEYTRWID DDSKCMAELQ GALQAQLPDG  360
NLGAIVEECM RHYDELFHLR AVLASSDVFH LMTGMWAAPA ERCFLWMAGF RPSEILKMLI  420
PQLDPLTEQQ LMGMCSLQQS SEQTEEALAQ GLHQLHQSLA DAVGGGPLND GADVANYTGL  480
MALALGRLEN LESFYRQADN LRQETLHHMR RILTTRQTAR CFLSIGEYNR RLRALSSLWA  540
SRPRENFIAT ENVSPTGTEF QVIQQSQQNQ FSGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-124	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G19350.3