PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G15890.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | AP2 | ||||||||
Protein Properties | Length: 405aa MW: 44482.9 Da PI: 7.9748 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.6 | 6.2e-13 | 88 | 144 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g OGLUM05G15890.2 88 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 144 57*******************6666777775555599******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MASPGPAAGM QQKQEAAAAA AGGGDGAEWG RGMQKMEAVG AGGEGVGVGA EQVAPPPRRP 60 VAARKERVCT AKERISRMPP CAAGKRSSIY RGVTRHRWTG RYEAHLWDKS TWNQNQNKKG 120 KQGAYDDEEA AARAYDLAAL KYWGAGTQIN FPVSDYARDL EEMQMISKED YLVSLRRQLH 180 NSRWDASLGH LLGNDYMSLG KDITLDGKFA GTFGLERKID LTNYIRWWLP KKTRQSDTSK 240 MEEVTDEIRA IESSMQRTEP YKFPSLGLHS NSKPSSVVLS ACDILSQSDA FKSFSEKSTK 300 LSEECTFSKE MDEGKTVTPV PATGHDTTAV NMNVNGLLVQ RAPYTLPSVT AQMKNTWNPA 360 DPSADPLFWT NFILPASQPV TMATIATTTF AKNEVSSSDP FHGQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 8e-88 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G15890.2 |