PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G13600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 268aa MW: 27587.8 Da PI: 7.347 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.4e-19 | 49 | 98 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIr+p++ r r +lg+f tae+Aa+a+++a++ l+g OGLUM05G13600.1 49 RYRGVRQRS-WGKWVAEIREPRK---RSRKWLGTFATAEDAARAYDRAALLLYG 98 59****999.**********954...5**********************98877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MEPSDDACTV AAPAAETAAS SSGAGGGGGG GRTKKKAAGK GGPENGKFRY RGVRQRSWGK 60 WVAEIREPRK RSRKWLGTFA TAEDAARAYD RAALLLYGPR AHLNLTAPPP LPPPPPSSAA 120 AAAASSSSAA SSTSAPPPPL RPLLPRPPHL HPAFHHQPFH HHLLQPQPPP PLYYAATAST 180 STVTTTTTAP PPQLAAAAPA AVLVAAAVSS TAETQAVVAT APEDAASAAA AAAEEEEAAW 240 GFHGGDEEDY AAALLWSEPD PWFDLFLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40220.1 | 1e-18 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G13600.1 |