PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G05910.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 269aa    MW: 29102.7 Da    PI: 10.6535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G05910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.9e-2160110255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      +++GVr+++ +grW+AeIrdp+eng  +r++lg+f+tae Aa+a++ a ++l+g
  OGLUM05G05910.1  60 RFTGVRRRP-WGRWAAEIRDPKENG--RRVWLGTFDTAEAAAAAYDDACLRLRG 110
                      689******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MAMEGEVEGG GRRRVVRIIF RDEDATDSSS SEEEGEGEVV AARRVVVKRT RLRCQEVERR  60
FTGVRRRPWG RWAAEIRDPK ENGRRVWLGT FDTAEAAAAA YDDACLRLRG PGAALNLPSR  120
RCVAPAPPPP PPPPPPTAEE KKPLLFPLPL PPRKKPLLYP PPLPPKKKPL PPPSPPPQPP  180
LPEKENTPLP PLLLPPKKKP LPPPSPTAAA KEEPIELEHA APPPPFVPRS VWPLLASGGG  240
GKRKKQSGCG GRIPALNTAA AAVEETGRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-15ERF family protein