PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G02160.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | TALE | ||||||||
Protein Properties | Length: 309aa MW: 33234.1 Da PI: 5.0141 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.9 | 2e-09 | 242 | 275 | 22 | 55 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ +q+ +WF N+R ++ OGLUM05G02160.2 242 WPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 275 59*****************************885 PP | |||||||
2 | ELK | 33.1 | 1.2e-11 | 195 | 216 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsg+L+ L++EF+ OGLUM05G02160.2 195 ELKEMLLKKYSGCLSRLRSEFL 216 9********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MEDLYSIHPG ISRGGGGGGG GAASEASGVA GGGSSPPHPP PPATTAAAAD LTELMKAQIA 60 GHPSYPSLLS AYIECRKVGA PPEVTTLLEE IGREGRGGGA TAGGEIGLDP ELDEFMETYC 120 RVLERYKEEL TRPFDEAASF LTGIHTQLAS LCGGAPPPTD NSDEMVGSSE DEPCSGDADA 180 ADFGQEHSSR LADHELKEML LKKYSGCLSR LRSEFLKKRK KGKLPKDARS ALMDWWNTHY 240 RWPYPTEEDK VRLAAMTGLD PKQINNWFIN QRKRHWKPSE DMRFALMEGV TGGSSSGTTL 300 YFDTGTIGP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 211 | 220 | LRSEFLKKRK |
2 | 217 | 221 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23380.1 | 4e-77 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G02160.2 |