PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G02160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | TALE | ||||||||
Protein Properties | Length: 302aa MW: 32528.4 Da PI: 5.2561 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.9 | 1.9e-09 | 235 | 268 | 22 | 55 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ +q+ +WF N+R ++ OGLUM05G02160.1 235 WPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 268 59*****************************885 PP | |||||||
2 | ELK | 33.2 | 1.2e-11 | 188 | 209 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsg+L+ L++EF+ OGLUM05G02160.1 188 ELKEMLLKKYSGCLSRLRSEFL 209 9********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MEDLYSIHPG ISRGGGGGGG GAASEASGVA GGGSSPPHPP PPATTAAAAD LTELMKAQIA 60 GHPSYPSLLS AYIECRKVGA PPEVTTLLEE IGREGRGGGA TAGGEIGLDP ELDEFMETYC 120 RVLERYKEEL TRPFDEAASF LTGIHTQLAS LCGGAPPPTD NSEDEPCSGD ADAADFGQEH 180 SSRLADHELK EMLLKKYSGC LSRLRSEFLK KRKKGKLPKD ARSALMDWWN THYRWPYPTE 240 EDKVRLAAMT GLDPKQINNW FINQRKRHWK PSEDMRFALM EGVTGGSSSG TTLYFDTGTI 300 GP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 204 | 213 | LRSEFLKKRK |
2 | 210 | 214 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23380.1 | 2e-74 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G02160.1 |