PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G01570.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | AP2 | ||||||||
Protein Properties | Length: 502aa MW: 54243.7 Da PI: 7.4858 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.4e-17 | 170 | 219 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OGLUM05G01570.2 170 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 219 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 502 aa Download sequence |
MELDLNNVAE GVVEKHETAA RSDSGTSESS VLNGEASGAA AAPAEEGSSS TPPPPPAAVL 60 EFSILRSSAS ASGENDADDD EEEEATPSPP PHHQHQQLLV TRELFPSAAP SPRPAPQHWA 120 ELGFLRPDPP RPHPDIRILA HAPPPAPPPP PPPQPQAAKK SRRGPRSRSS QYRGVTFYRR 180 TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV EADINFNLSD YEEDMRQMKS 240 LSKEEFVHVL RRQSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKAYDK AAIKCNGREA 300 VTNFEPSTYD GELPTDAAAQ GADVDLNLSI SQPAASQQSP KRDSGSLGLQ IHHGSFEGSE 360 FKRAKASCNS NDAAPSELAS RPHRFPLLTE HPPIWTAQPH PLFPNNEDAS RSSDQKRKPS 420 EGVAVPSWAW KQVSHHHPAP PHTLPLPFFS SSSSSPSSSS AAASSGFSKA ATTAAAAQHT 480 ATLRFDPTAP SSSSSSRHHH HH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 3e-83 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G01570.2 |