PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM04G27860.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 139aa MW: 14882.5 Da PI: 4.9109 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67 | 3.5e-21 | 2 | 52 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr+++ +g+WvAeIr+p +r++lg++gtae+Aa+a+++a++ + g OGLUM04G27860.1 2 TKYKGVRQRH-WGSWVAEIRHP-----LlkTRIWLGTYGTAEDAARAYDEAARLMSG 52 69*******9.**********8.....334**********************98766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MTKYKGVRQR HWGSWVAEIR HPLLKTRIWL GTYGTAEDAA RAYDEAARLM SGPAARTNFP 60 LSSGGGNARS CLSPTLRARL EKCCGAGSSA QAQQGAVAGQ DDNDDAAAAA AMGVDDGDEY 120 VEEMIQELTF YGSIEIVQP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 3e-26 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM04G27860.1 |